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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48762117_48762874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48762117 - 48762874

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTTAA

U12 Branch Point Sequence:

TTGCTCCTATTT

Flanking Amino Acid:

ARPDEFAALCDLLGNRLESE

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

0.17

1.3

49.4

Major PPT

77.8

0.63

0.8

77.4

31.1

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

48.2

-0

1.9

69.53

41.8

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638