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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48764630_48764914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48764630 - 48764914

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

GTGCAGTTAACC

Flanking Amino Acid:

LTFLPASTNQPNIVLLRDRL

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

74.1

0.54

0.8

68.2

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

48.1

-0.1

2.2

61.8

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638