Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_48773132_48773887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48773132 - 48773887

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCAGT

5'SS Class:

major

3'SS Sequence:

CCTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GCCGTGTTGACG

Flanking Amino Acid:

ALNRAAKKKKVPDNFMPPVP

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

67.2

43.7

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

77.4

0.62

0.7

69.1

31.5

Minor 5ss

47.3

-0.3

2.6

43.8

Minor BPS

42.4

-0.7

2.1

41.72

43.8

Associated Gene:

Gene:

SEC31A

Ensembl Gene ID:

ENSAPLG00000010192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010704

48744081 - 48777718

33638