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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4879753_4882621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4879753 - 4882621

Intron Length:

2869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

GGATGGTAAAGT

Flanking Amino Acid:

YPGWSARDNYGKKKKRKREK

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.1

41.9

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

78.3

0.64

0.9

71.9

Minor 5ss

-1.5

49.3

Minor BPS

37.1

-0.9

2.6

53.81

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017525

4879693 - 4891082

11390