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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48809117_48809361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48809117 - 48809361

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

TCGGTCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAG

U12 Branch Point Sequence:

CCCGCGTTAAGC

Flanking Amino Acid:

INASKNQQDDGKMFIGGLSW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

53.8

42.3

Major BPS

49.2

-0

1.6

44.6

Major PPT

65.5

0.35

0.8

62.6

34.6

Minor 5ss

-2.5

3.6

29.8

43.2

Minor BPS

43.2

-0.5

2.3

48.91

47.7

Associated Gene:

Gene:

HNRNPDL

Ensembl Gene ID:

ENSAPLG00000011774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012282

48808640 - 48812182

3543