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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48812307_48812999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48812307 - 48812999

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGGTCT

5'SS Class:

major

3'SS Sequence:

CTTGGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GAGTTCTGACAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

67.5

38.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

79.2

0.66

0.8

76.9

37.3

Minor 5ss

45.6

-0.5

3.1

44.8

Minor BPS

46.1

-0.2

1.8

59.85

Associated Gene:

Gene:

HNRNPD

Ensembl Gene ID:

ENSAPLG00000031205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048447

48812203 - 48820264

8062