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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48814058_48816870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48814058 - 48816870

Intron Length:

2813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

AATGTCTTAACG

Flanking Amino Acid:

IDASKNEEDEGKMFIGGLSW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

77.1

0.67

77.9

32.2

Major PPT

0.74

0.8

77.2

31.6

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

67.2

0.4

1.5

66.52

41.2

Associated Gene:

Gene:

HNRNPD

Ensembl Gene ID:

ENSAPLG00000031205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048447

48812203 - 48820264

8062