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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48817040_48817557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48817040 - 48817557

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGTTA

5'SS Class:

major

3'SS Sequence:

GAATTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTTGTTTGAATT

Flanking Amino Acid:

LFKESESVDKVMDQKEHKLN

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

38.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

71.1

0.47

62.3

43.8

Minor 5ss

38.3

-1.3

3.7

54.8

49.4

Minor BPS

55.5

0.25

1.5

71.39

40.7

Associated Gene:

Gene:

HNRNPD

Ensembl Gene ID:

ENSAPLG00000031205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048447

48812203 - 48820264

8062