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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48818958_48819859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48818958 - 48819859

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTGATGTCAACT

Flanking Amino Acid:

KKYHNVGLSKCEIKVAMSKE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

69.5

35.6

Major BPS

0.72

38.9

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

33.3

-1.9

3.5

42.7

39.1

Minor BPS

45.5

-0.2

2.2

64.08

46.3

Associated Gene:

Gene:

HNRNPD

Ensembl Gene ID:

ENSAPLG00000031205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048447

48812203 - 48820264

8062