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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48842656_48842786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48842656 - 48842786

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGAATG

5'SS Class:

major

3'SS Sequence:

TCTCACCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTGCCTCTCACC

Flanking Amino Acid:

RVYLHCTNPQHPKYREGDVT

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

69.6

41.1

Major BPS

72.7

0.56

30.1

Major PPT

76.9

0.61

0.8

69.3

31.1

Minor 5ss

39.3

-1.2

3.1

55.3

42.6

Minor BPS

-0.1

2.1

64.23

41.5

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058