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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48842906_48843167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48842906 - 48843167

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCGTAGA

5'SS Class:

major

3'SS Sequence:

CCTGTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GGGTGCTGATTT

Flanking Amino Acid:

LVDASFEPLPDYWLSLLYKR

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

65.5

41.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

74.8

0.56

0.8

31.6

Minor 5ss

29.1

-2.4

2.8

33.3

Minor BPS

43.9

-0.3

58.24

44.7

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058