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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48843283_48843361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48843283 - 48843361

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TGGTTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CTGGTGCCACCT

Flanking Amino Acid:

QLSNTYLAGFMWLDKLGLAA

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

74.3

36.2

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

72.9

0.52

1.1

69.6

41.6

Minor 5ss

31.4

-2.1

3.3

44.7

43.5

Minor BPS

32.2

-1.2

2.3

47.37

45.4

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058