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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48843469_48843768_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48843469 - 48843768

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCCCGCT

5'SS Class:

major

3'SS Sequence:

CGACACCACGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCCCCACGACA

Flanking Amino Acid:

FATAVRDVLEIVAATVPGKK

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.2

56.9

42.5

Major BPS

100

1.24

0.5

100

Major PPT

55.1

0.11

47.1

35.1

Minor 5ss

-1.4

3.6

56.7

47.5

Minor BPS

49.1

-0

1.9

65.72

40.3

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058