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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48843863_48844368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48843863 - 48844368

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCCCCCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTCCCCTTCATT

Flanking Amino Acid:

GKVIDSVTWHHYYVNGRSAT

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

0.62

1.1

77.2

Major PPT

75.9

0.58

0.7

69.2

24.6

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

65.1

0.56

1.8

81.08

41.1

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058