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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48844717_48844796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48844717 - 48844796

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ACGTCCTCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ACGTCCTCACCA

Flanking Amino Acid:

GYNLSWELGNEPNSFKKKSG

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

64.2

0.32

55.9

39.4

Minor 5ss

-2.5

33.4

41.6

Minor BPS

51.6

0.05

1.9

61.73

44.5

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058