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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48844971_48845067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48844971 - 48845067

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGTGCCTCCTCC

Flanking Amino Acid:

QKKHKNTTITGHTLDILHGF

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

74.8

0.56

0.7

24.8

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

36.4

-1

3.6

59.17

45.7

Associated Gene:

Gene:

HPSE

Ensembl Gene ID:

ENSAPLG00000012084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012614

48841960 - 48847017

5058