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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48853519_48854119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48853519 - 48854119

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTGT

5'SS Class:

major

3'SS Sequence:

CTCGTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTAACT

Flanking Amino Acid:

FASCVLHFCEELEEFWVYKA

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.3

39.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.6

0.46

0.9

65.5

34.9

Minor 5ss

38.5

-1.3

3.4

56.5

47.6

Minor BPS

83.1

1.12

0.9

92.23

29.9

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012840

48850953 - 48864960

14008