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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48857414_48857939_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48857414 - 48857939

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGTA

5'SS Class:

major

3'SS Sequence:

GCAAAATTTATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GCTTGCAAAATT

Flanking Amino Acid:

NLLLSLVGLKIAVTQEEVYD

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

67.8

37.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

59.4

0.21

50.5

42.5

Minor 5ss

45.6

-0.5

3.2

64.6

46.8

Minor BPS

-0.3

2.2

65.08

45.7

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012840

48850953 - 48864960

14008