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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48860133_48860825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48860133 - 48860825

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATG

Flanking Amino Acid:

FTFSRLLNFKYSSNLKKADP

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.6

0.53

70.8

38.9

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

72.9

0.58

1.2

71.67

35.7

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012840

48850953 - 48864960

14008