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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48860925_48861478_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48860925 - 48861478

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGTACA

5'SS Class:

major

3'SS Sequence:

TAAATCTACCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TCTGGCTTAAAT

Flanking Amino Acid:

AEYYTKNFRPVELKEYIKIR

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.3

71.9

39.6

Major BPS

0.5

1.1

76.9

32.8

Major PPT

59.9

0.22

51.9

42.4

Minor 5ss

31.9

-2.1

2.5

36.6

39.8

Minor BPS

57.9

0.33

76.73

45.7

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012840

48850953 - 48864960

14008