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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48862126_48863319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48862126 - 48863319

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGGAAA

5'SS Class:

major

3'SS Sequence:

TTTCTGTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TAATCCTCATCC

Flanking Amino Acid:

LPYVAIVQEKLHMLGEGSRG

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.3

67.5

39.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

33.1

-1.9

2.9

39.5

Minor BPS

58.1

0.23

1.8

69.3

41.5

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012840

48850953 - 48864960

14008