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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48863499_48863987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48863499 - 48863987

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATAGAA

5'SS Class:

major

3'SS Sequence:

TTTAATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

RQLRGIETLYEWQHDCLTLE

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

65.9

33.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.3

0.84

0.8

84.9

35.2

Minor 5ss

-2.3

3.3

35.1

43.3

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

HELQ

Ensembl Gene ID:

ENSAPLG00000012292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025725

48861952 - 48864960

3009

ENSAPLT00000012840

48850953 - 48864960

14008