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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48868199_48868656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48868199 - 48868656

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCA

5'SS Class:

major

3'SS Sequence:

ATTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TTAATCTCAAAA

Flanking Amino Acid:

MYATLQEELKNICSTVEVSE

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.3

71.6

40.2

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

0.76

0.8

77.8

30.1

Minor 5ss

29.9

-2.3

2.6

34.3

Minor BPS

54.2

0.13

1.7

66.73

38.9

Associated Gene:

Gene:

ABRAXAS1

Ensembl Gene ID:

ENSAPLG00000012556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013081

48867518 - 48873999

6482