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Intron Name: Anas_platyrhynchos_platyrhynchos_4_48868742_48869345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48868742 - 48869345

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAC

5'SS Class:

major

3'SS Sequence:

TCTTTGTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAGTTTTGAATT

Flanking Amino Acid:

SGFVRAVRQHRSDFFYEDGS

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

57.5

41.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

85.8

0.81

0.8

80.7

31.4

Minor 5ss

29.3

-2.4

3.5

45.6

Minor BPS

61.2

0.43

1.4

73.2

38.2

Associated Gene:

Gene:

ABRAXAS1

Ensembl Gene ID:

ENSAPLG00000012556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013081

48867518 - 48873999

6482