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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49104461_49104806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49104461 - 49104806

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

FVRYISTTALCNEVERMMER

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

69.6

41.1

Major BPS

0.72

78.4

31.2

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

31.1

-2.2

3.6

43.6

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

USP53

Ensembl Gene ID:

ENSAPLG00000027499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027806

49096241 - 49106975

10735