Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_49159767_49162474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49159767 - 49162474

Intron Length:

2708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAATTGAA

5'SS Class:

major

3'SS Sequence:

TCTTATTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTCTCTTATTC

Flanking Amino Acid:

EETRELQVTAAAVVPSAQSL

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

70.8

34.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.1

0.7

0.8

73.8

36.5

Minor 5ss

32.6

-2

3.2

40.9

45.4

Minor BPS

60.6

0.31

1.5

69.76

35.7

Associated Gene:

Gene:

PDE5A

Ensembl Gene ID:

ENSAPLG00000013130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027939

49143925 - 49202602

58678

ENSAPLT00000043669

49146517 - 49202602

56086

ENSAPLT00000024089

49130335 - 49202602

72268

ENSAPLT00000036387

49140636 - 49270648

130013

ENSAPLT00000018437

49143925 - 49270648

126724

ENSAPLT00000034783

49138963 - 49202602

63640

ENSAPLT00000013714

49144819 - 49202602

57784

ENSAPLT00000032967

49130335 - 49201835

71501