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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49175254_49176439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49175254 - 49176439

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACCAAAG

Flanking Amino Acid:

TSLLENRRNQVLLDLASLIF

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.9

32.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

46.7

-0.3

2.8

45.1

Minor BPS

46.4

-0.4

2.2

63.66

43.2

Associated Gene:

Gene:

PDE5A

Ensembl Gene ID:

ENSAPLG00000013130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013714

49144819 - 49202602

57784

ENSAPLT00000032967

49130335 - 49201835

71501

ENSAPLT00000027939

49143925 - 49202602

58678

ENSAPLT00000043669

49146517 - 49202602

56086

ENSAPLT00000024089

49130335 - 49202602

72268

ENSAPLT00000036387

49140636 - 49270648

130013

ENSAPLT00000018437

49143925 - 49270648

126724

ENSAPLT00000034783

49138963 - 49202602

63640