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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49300251_49303690_F

Intron Information:

Intron Rank:

131825

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49300251 - 49303690

Intron Length:

3440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCAAAGC

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTCTTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.3

54.3

43.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.7

0.8

0.7

77.3

31.5

Minor 5ss

27.5

-2.6

35.7

40.5

Minor BPS

63.1

0.41

1.4

67.32

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035528

49300086 - 49306915

6830