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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49312888_49313646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49312888 - 49313646

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTCTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAACTGTTAATC

Flanking Amino Acid:

VTFLPLLETACAFDLLIYTD

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

84.4

0.85

34.5

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

49.7

-0

61.46

37.8

Associated Gene:

Gene:

MAD2L1

Ensembl Gene ID:

ENSAPLG00000013807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014388

49312096 - 49314659

2564

ENSAPLT00000045160

49312715 - 49314659

1945