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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49313751_49314191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49313751 - 49314191

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CCTATTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

GCTCTCTTAATA

Flanking Amino Acid:

IECDKTAKDETVPREKSQKA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

38.4

Major BPS

0.75

78.6

Major PPT

84.2

0.77

0.8

76.1

37.8

Minor 5ss

-2.2

2.6

32.6

Minor BPS

67.8

0.56

1.2

37.5

Associated Gene:

Gene:

MAD2L1

Ensembl Gene ID:

ENSAPLG00000013807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014388

49312096 - 49314659

2564

ENSAPLT00000045160

49312715 - 49314659

1945