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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49377377_49381667_R

Intron Information:

Intron Rank:

136661

Intron Class:

major

Intron Phase:

Intron Coordinates:

49377377 - 49381667

Intron Length:

4291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGGTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAC

U12 Branch Point Sequence:

TTTTTTGGTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

0.42

1.3

76.7

34.4

Major PPT

83.9

0.76

0.9

79.9

37.7

Minor 5ss

35.1

-1.7

3.5

50.3

46.3

Minor BPS

45.2

-0.3

2.3

66.93

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035381

49376604 - 49383516

6913