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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49381722_49383324_R

Intron Information:

Intron Rank:

136662

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49381722 - 49383324

Intron Length:

1603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

AGGAACATTACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

CTTCCTTCTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

58.1

0.18

1.1

47.6

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

48.8

-0

1.8

69.34

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035381

49376604 - 49383516

6913