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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49383651_49384378_F

Intron Information:

Intron Rank:

146894

Intron Class:

major

Intron Phase:

Intron Coordinates:

49383651 - 49384378

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGGGAT

5'SS Class:

major

3'SS Sequence:

CTTGCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGACTCTAAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

63.9

42.4

Major BPS

0.57

73.6

28.6

Major PPT

83.9

0.76

0.8

80.8

31.2

Minor 5ss

29.1

-2.4

3.8

47.6

Minor BPS

47.2

-0.2

1.9

56.92

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026684

49383180 - 49386106

2927