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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_49433514_49433873_R

Intron Information:

Intron Rank:
149676
Intron Class:
major
Intron Phase:
Intron Coordinates:
49433514 - 49433873
Intron Length:
360

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTATGCTCA
5'SS Class:
major
3'SS Sequence:
TCCTTGCATTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTGAA
U12 Branch Point Sequence:
TGTCCTTGCATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.8
0.51
1.1
61.2
40.2
Major BPS
79.4
0.73
0.9
69.6
37.5
Major PPT
71.7
0.49
0.9
69.9
35.7
Minor 5ss
49.8
-0
2.4
56.7
47.6
Minor BPS
48.9
-0
1.9
70.97
40.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000028053
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000031398
49430915 - 49434067
3153