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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49442314_49445318_R

Intron Information:

Intron Rank:

149666

Intron Class:

major

Intron Phase:

Intron Coordinates:

49442314 - 49445318

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGATTTTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

100

1.12

0.4

100

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

58.2

0.24

1.4

64.33

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017297

49437113 - 49458919

21807