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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49445464_49452003_R

Intron Information:

Intron Rank:

149667

Intron Class:

major

Intron Phase:

Intron Coordinates:

49445464 - 49452003

Intron Length:

6540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

AAGTAGGTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

65.3

0.38

71.6

30.1

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

38.3

-1

2.5

43.49

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028420

49436621 - 49452042

15422

ENSAPLT00000017297

49437113 - 49458919

21807