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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49475437_49480777_R

Intron Information:

Intron Rank:

129935

Intron Class:

major

Intron Phase:

Intron Coordinates:

49475437 - 49480777

Intron Length:

5341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CAAATGTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

75.1

0.56

0.9

68.7

37.2

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

41.5

-0.6

45.44

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038066

49475088 - 49484591

9504