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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49527267_49527927_R

Intron Information:

Intron Rank:

132466

Intron Class:

major

Intron Phase:

Intron Coordinates:

49527267 - 49527927

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TAATAGTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

78.6

0.71

78.6

Major PPT

85.3

0.79

0.8

77.6

40.8

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

48.1

-0.1

2.3

63.22

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038931

49525173 - 49529403

4231