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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49583947_49597245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49583947 - 49597245

Intron Length:

13299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTGA

5'SS Class:

major

3'SS Sequence:

TTCTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTGGATT

Flanking Amino Acid:

TLRVHIRSHTGERPYQCPYC

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.1

41.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

34.4

-1.8

3.5

47.2

48.2

Minor BPS

64.9

0.55

1.4

80.12

35.6

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024769

49565687 - 49651534

85848

ENSAPLT00000014440

49565687 - 49651534

85848

ENSAPLT00000035714

49565687 - 49651534

85848

ENSAPLT00000026121

49565687 - 49627795

62109

ENSAPLT00000026027

49565687 - 49651534

85848