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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49597340_49636199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49597340 - 49636199

Intron Length:

38860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATTTG

5'SS Class:

major

3'SS Sequence:

TTGCCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GAAACTTTCATT

Flanking Amino Acid:

QEQKNLAAIQTHTGEKEKIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

72.1

40.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

80.8

0.69

0.8

77.5

31.2

Minor 5ss

41.8

-0.9

3.2

57.3

47.4

Minor BPS

1.7

63.48

40.8

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026027

49565687 - 49651534

85848