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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49599032_49605713_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49599032 - 49605713

Intron Length:

6682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTCTGTGACAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

ATCTCTGTGACA

Flanking Amino Acid:

SLQRHLLIHNTFVTPSVLKS

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

54.7

0.11

1.1

54.8

38.6

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

53.8

0.11

67.93

38.9

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026121

49565687 - 49627795

62109