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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49599155_49605713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49599155 - 49605713

Intron Length:

6559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

GTATCTTTAAAC

Flanking Amino Acid:

SLQRHLLIHNSERTFKCDHC

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

0.7

0.9

79.6

29.1

Major PPT

73.3

0.52

79.9

30.9

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

70.4

0.62

1.3

73.57

36.6

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035714

49565687 - 49651534

85848

ENSAPLT00000024769

49565687 - 49651534

85848

ENSAPLT00000014440

49565687 - 49651534

85848