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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49612502_49613792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49612502 - 49613792

Intron Length:

1291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

TCATTTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TCATTTTCTACA

Flanking Amino Acid:

QLKRHMITHSEKRPYTCEVC

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

85.2

0.79

0.8

80.1

31.8

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

47.9

-0.1

1.8

59.34

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035714

49565687 - 49651534

85848

ENSAPLT00000026121

49565687 - 49627795

62109

ENSAPLT00000024769

49565687 - 49651534

85848

ENSAPLT00000014440

49565687 - 49651534

85848