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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49623676_49623936_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49623676 - 49623936

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTTGTGT

5'SS Class:

weak_major

3'SS Sequence:

TTATCCCATATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TATCCCATATAG

Flanking Amino Acid:

VCNTSFSSESSYEQHKEACR

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

42.2

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

0.5

0.9

66.8

34.4

Minor 5ss

-1

3.1

57.2

46.9

Minor BPS

46.6

-0.3

57.02

43.5

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026121

49565687 - 49627795

62109

ENSAPLT00000014440

49565687 - 49651534

85848