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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49636323_49651441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49636323 - 49651441

Intron Length:

15119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAAGTTTTAATT

Flanking Amino Acid:

GLYTARRVRKVRGSKGEVLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.67

77.1

41.6

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

63.4

0.5

1.3

73.01

38.5

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026027

49565687 - 49651534

85848