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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49646431_49651441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49646431 - 49651441

Intron Length:

5011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCATTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTCTTTTATA

Flanking Amino Acid:

GLYTARRVRKGEKFGPFAGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

72.6

0.51

0.8

70.5

35.2

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

72.9

0.71

1.5

82.82

31.5

Associated Gene:

Gene:

PRDM5

Ensembl Gene ID:

ENSAPLG00000013828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035714

49565687 - 49651534

85848

ENSAPLT00000024769

49565687 - 49651534

85848

ENSAPLT00000014440

49565687 - 49651534

85848