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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49679261_49680321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49679261 - 49680321

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCTG

5'SS Class:

major

3'SS Sequence:

AACCTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GTTCTGTTAACC

Flanking Amino Acid:

SSYLFRDTPKRYFFVVEEDN

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.2

43.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

63.9

0.31

0.8

55.1

35.5

Minor 5ss

-0.7

2.8

58.7

45.8

Minor BPS

58.4

0.24

2.1

72.25

38.6

Associated Gene:

Gene:

NDNF

Ensembl Gene ID:

ENSAPLG00000018459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037552

49675067 - 49695925

20859