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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49680511_49695410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49680511 - 49695410

Intron Length:

14900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CAGCTCTCACCA

Flanking Amino Acid:

GSARTGRDAARMLLLHCPLL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

72.7

0.56

30.1

Major PPT

76.2

0.59

69.6

41.6

Minor 5ss

-2.2

3.3

45.6

Minor BPS

44.6

-0.4

1.8

49.57

41.4

Associated Gene:

Gene:

NDNF

Ensembl Gene ID:

ENSAPLG00000018459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037552

49675067 - 49695925

20859