Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_49811865_49812677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49811865 - 49812677

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

GACTCCTTTATG

Flanking Amino Acid:

SPMWHVQRLEVKYDFLYEKV

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

0.42

1.1

38.5

Major PPT

75.4

0.57

68.6

41.6

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

56.3

0.05

1.7

57.01

44.7

Associated Gene:

Gene:

QRFPR

Ensembl Gene ID:

ENSAPLG00000014381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022500

49809805 - 49823550

13746

ENSAPLT00000015003

49807431 - 49823550

16120