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Intron Name: Anas_platyrhynchos_platyrhynchos_4_49945494_49945668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49945494 - 49945668

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCTGCG

5'SS Class:

major

3'SS Sequence:

TTGCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

AATTCTGTAGCT

Flanking Amino Acid:

GCCVVELGRTRVLGQVSCEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.2

56.7

42.7

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

0.56

0.8

69.5

31.1

Minor 5ss

31.7

-2.1

3.3

40.8

45.6

Minor BPS

51.4

0.12

2.2

75.44

41.4

Associated Gene:

Gene:

EXOSC9

Ensembl Gene ID:

ENSAPLG00000004920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005116

49945172 - 49949695

4524